Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktotalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktotalea |
| Species | Planktotalea frisia |
| Strain | SH6-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950073 bp
Thymine Count
948589 bp
Guanine Count
1104133 bp
Cytosine Count
1103941 bp
Genome Length
4106736 bp
Protein-coding Genes
4102 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rod shape-determining protein roda | PFRI_41250 | Not Available | Negative | 4060073 - 4061212 | 41772.5 |
| stage v sporulation protein d | PFRI_41260 | Not Available | Negative | 4061209 - 4063155 | 71636.8 |
| hypothetical protein | PFRI_41270 | Not Available | Negative | 4063152 - 4063691 | 19898.3 |
| cell shape-determining protein mrec | PFRI_41280 | Not Available | Negative | 4063684 - 4064607 | 34087.9 |
| rod shape-determining protein mreb | PFRI_41290 | Not Available | Negative | 4064660 - 4065706 | 36929.9 |
| 2-isopropylmalate synthase | PFRI_41300 | Not Available | Negative | 4065925 - 4067508 | 57233.8 |
| c-factor | PFRI_41310 | Not Available | Positive | 4067747 - 4068442 | 24594.5 |
| deoxyribodipyrimidine photo-lyase-related protein | PFRI_41320 | Not Available | Positive | 4068439 - 4069962 | 57289.0 |
| morn repeat protein | PFRI_41330 | Not Available | Negative | 4069966 - 4071375 | 49950.6 |
| glutamine-dependent nad(+) synthetase | PFRI_41340 | Not Available | Positive | 4071534 - 4073207 | 61027.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
