Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktotalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktotalea |
| Species | Planktotalea frisia |
| Strain | SH6-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950073 bp
Thymine Count
948589 bp
Guanine Count
1104133 bp
Cytosine Count
1103941 bp
Genome Length
4106736 bp
Protein-coding Genes
4102 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphopentomutase | PFRI_40750 | Not Available | Positive | 4012998 - 4014176 | 41885.7 |
| aminodeoxyfutalosine deaminase | PFRI_40760 | Not Available | Positive | 4014173 - 4015180 | 36469.9 |
| uracil phosphoribosyltransferase | PFRI_40770 | Not Available | Positive | 4015184 - 4015819 | 23028.3 |
| porphobilinogen deaminase | PFRI_40780 | Not Available | Positive | 4016094 - 4017041 | 34181.0 |
| putative fad-linked oxidoreductase | PFRI_40790 | Not Available | Negative | 4017048 - 4018451 | 49862.9 |
| tetraacyldisaccharide 4'-kinase | PFRI_40800 | Not Available | Negative | 4018491 - 4019474 | 35044.4 |
| 3-deoxy-d-manno-octulosonic acid transferase | PFRI_40810 | Not Available | Negative | 4019474 - 4020685 | 44619.4 |
| hypothetical protein | PFRI_40820 | Not Available | Negative | 4020693 - 4020935 | 9111.71 |
| inositol-1-monophosphatase | PFRI_40830 | Not Available | Negative | 4020990 - 4021772 | 28385.5 |
| metalloprotease pmba | PFRI_40840 | Not Available | Negative | 4021759 - 4023105 | 47194.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
