Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktotalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktotalea |
| Species | Planktotalea frisia |
| Strain | SH6-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950073 bp
Thymine Count
948589 bp
Guanine Count
1104133 bp
Cytosine Count
1103941 bp
Genome Length
4106736 bp
Protein-coding Genes
4102 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ecf rna polymerase sigma factor sigh | PFRI_40650 | Not Available | Negative | 4001033 - 4001533 | 18420.0 |
| hypothetical protein | PFRI_40660 | Not Available | Negative | 4001598 - 4002074 | 18035.3 |
| hypothetical protein | PFRI_40670 | Not Available | Negative | 4002288 - 4003058 | 29147.3 |
| serine hydroxymethyltransferase 1 | PFRI_40680 | Not Available | Negative | 4003248 - 4004537 | 46013.9 |
| nad kinase | PFRI_40690 | Not Available | Positive | 4004703 - 4005464 | 27445.2 |
| acetyl-coenzyme a synthetase | PFRI_40700 | Not Available | Negative | 4005646 - 4007532 | 68167.6 |
| nadp-dependent malic enzyme | PFRI_40710 | Not Available | Negative | 4007731 - 4010040 | 82714.4 |
| cupin domain protein | PFRI_40720 | Not Available | Positive | 4010213 - 4011304 | 40206.7 |
| cytidine deaminase | PFRI_40730 | Not Available | Positive | 4011301 - 4011693 | 13297.8 |
| thymidine phosphorylase | PFRI_40740 | Not Available | Positive | 4011694 - 4012998 | 44366.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
