Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktotalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktotalea |
| Species | Planktotalea frisia |
| Strain | SH6-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950073 bp
Thymine Count
948589 bp
Guanine Count
1104133 bp
Cytosine Count
1103941 bp
Genome Length
4106736 bp
Protein-coding Genes
4102 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sn-glycerol-3-phosphate import atp-binding protein ugpc | PFRI_40450 | Not Available | Negative | 3983165 - 3984208 | 38255.0 |
| putative abc transporter-binding protein precursor | PFRI_40460 | Not Available | Positive | 3984451 - 3985686 | 43359.4 |
| l-arabinose transport system permease protein arap | PFRI_40470 | Not Available | Positive | 3985792 - 3986814 | 37487.4 |
| trehalose transport system permease protein sugb | PFRI_40480 | Not Available | Positive | 3986818 - 3987699 | 32451.9 |
| hypothetical protein | PFRI_40490 | Not Available | Negative | 3988371 - 3988493 | 4727.73 |
| general stress protein 69 | PFRI_40500 | Not Available | Positive | 3988519 - 3989508 | 35553.4 |
| sulfite exporter taue/safe | PFRI_40510 | Not Available | Negative | 3989505 - 3990227 | 26198.2 |
| 4-carboxy-2-hydroxymuconate-6-semialdehyde dehydrogenase | PFRI_40520 | Not Available | Negative | 3990255 - 3991199 | 34660.2 |
| protocatechuate 4,5-dioxygenase beta chain | PFRI_40530 | Not Available | Negative | 3991196 - 3992065 | 32250.4 |
| protocatechuate 4,5-dioxygenase alpha chain | PFRI_40540 | Not Available | Negative | 3992065 - 3992472 | 15457.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
