Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktotalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktotalea |
| Species | Planktotalea frisia |
| Strain | SH6-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950073 bp
Thymine Count
948589 bp
Guanine Count
1104133 bp
Cytosine Count
1103941 bp
Genome Length
4106736 bp
Protein-coding Genes
4102 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| vitamin b12-dependent ribonucleoside-diphosphate reductase | PFRI_40350 | Not Available | Positive | 3971624 - 3973909 | 83660.6 |
| hypothetical protein | PFRI_40360 | Not Available | Negative | 3974560 - 3974883 | 12384.6 |
| hypothetical protein | PFRI_40370 | Not Available | Negative | 3975005 - 3975700 | 24654.6 |
| methionine synthase | PFRI_40380 | Not Available | Negative | 3975697 - 3976818 | 40957.5 |
| cupin domain protein | PFRI_40390 | Not Available | Negative | 3976841 - 3977806 | 34949.6 |
| snoal-like polyketide cyclase | PFRI_40400 | Not Available | Negative | 3977806 - 3978795 | 37102.7 |
| snoal-like polyketide cyclase | PFRI_40410 | Not Available | Negative | 3978819 - 3979766 | 35190.6 |
| putative hth-type transcriptional repressor exur | PFRI_40420 | Not Available | Negative | 3979763 - 3980782 | 36760.9 |
| snoal-like domain protein | PFRI_40430 | Not Available | Negative | 3980779 - 3981819 | 38737.0 |
| sulfopropanediol 3-dehydrogenase | PFRI_40440 | Not Available | Negative | 3981816 - 3983126 | 47121.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
