Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktotalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktotalea |
| Species | Planktotalea frisia |
| Strain | SH6-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950073 bp
Thymine Count
948589 bp
Guanine Count
1104133 bp
Cytosine Count
1103941 bp
Genome Length
4106736 bp
Protein-coding Genes
4102 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidase inhibitor i78 family protein | PFRI_40150 | Not Available | Negative | 3950988 - 3951290 | 10485.7 |
| hypothetical protein | PFRI_40160 | Not Available | Negative | 3951330 - 3952172 | 31331.8 |
| hypothetical protein | PFRI_40170 | Not Available | Positive | 3952314 - 3952970 | 23843.4 |
| pectate lyase superfamily protein | PFRI_40180 | Not Available | Negative | 3952979 - 3955267 | 82073.8 |
| hypothetical protein | PFRI_40190 | Not Available | Negative | 3955431 - 3955850 | 15574.7 |
| lysine--trna ligase | PFRI_40200 | Not Available | Negative | 3955910 - 3957526 | 61400.8 |
| tellurite resistance protein terb | PFRI_40210 | Not Available | Positive | 3957614 - 3958036 | 15622.7 |
| hemolysin-iii related | PFRI_40220 | Not Available | Positive | 3958229 - 3958936 | 25750.9 |
| thioredoxin-2 | PFRI_40230 | Not Available | Positive | 3958949 - 3959377 | 15495.1 |
| polyketide cyclase / dehydrase and lipid transport | PFRI_40240 | Not Available | Negative | 3959761 - 3960270 | 17924.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
