Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktotalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktotalea |
| Species | Planktotalea frisia |
| Strain | SH6-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950073 bp
Thymine Count
948589 bp
Guanine Count
1104133 bp
Cytosine Count
1103941 bp
Genome Length
4106736 bp
Protein-coding Genes
4102 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix protein | PFRI_39960 | Not Available | Negative | 3929828 - 3930082 | 9177.09 |
| hypothetical protein | PFRI_39970 | Not Available | Positive | 3930226 - 3930405 | 6331.01 |
| l-carnitine dehydrogenase | PFRI_39980 | Not Available | Negative | 3930409 - 3930882 | 17970.3 |
| aspartyl/glutamyl-trna(asn/gln) amidotransferase subunit b | PFRI_39990 | Not Available | Negative | 3930883 - 3932394 | 55173.8 |
| 5tmr of 5tmr-lyt | PFRI_40000 | Not Available | Positive | 3932576 - 3933790 | 45387.8 |
| hypothetical protein | PFRI_40010 | Not Available | Negative | 3933800 - 3935074 | 47157.1 |
| transglycosylase slt domain protein | PFRI_40020 | Not Available | Positive | 3935248 - 3935973 | 27031.6 |
| hypothetical protein | PFRI_40030 | Not Available | Negative | 3935970 - 3936401 | 16059.8 |
| aminopeptidase n | PFRI_40040 | Not Available | Negative | 3936398 - 3938950 | 95247.1 |
| malate synthase g | PFRI_40050 | Not Available | Positive | 3939084 - 3941423 | 85968.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
