Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktotalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktotalea |
| Species | Planktotalea frisia |
| Strain | SH6-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950073 bp
Thymine Count
948589 bp
Guanine Count
1104133 bp
Cytosine Count
1103941 bp
Genome Length
4106736 bp
Protein-coding Genes
4102 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Gene transfer aget (gta) orfg9-like phage major tail protein | PFRI_24090 | Not Available | Negative | 2383492 - 2383908 | 14558.0 |
| Gp33 | PFRI_24100 | Not Available | Negative | 2383951 - 2384355 | 14191.0 |
| phage head-tail joining protein | PFRI_24110 | Not Available | Negative | 2384352 - 2384690 | 12321.8 |
| phage gp6-like head-tail connector protein | PFRI_24120 | Not Available | Negative | 2384687 - 2385286 | 21752.2 |
| Major capsid protein precursor | PFRI_24130 | Not Available | Negative | 2385455 - 2386648 | 42310.3 |
| Putative prohead protease | PFRI_24140 | Not Available | Negative | 2386676 - 2387254 | 21162.3 |
| hypothetical protein | PFRI_24150 | Not Available | Negative | 2387266 - 2387487 | 8356.28 |
| Portal protein | PFRI_24160 | Not Available | Negative | 2387484 - 2388668 | 42476.0 |
| Terminase large subunit | PFRI_24170 | Not Available | Negative | 2388760 - 2390019 | 45760.6 |
| 5s ribosomal rna | Not Available | Not Available | Positive | 32 - 145 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
