Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktotalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktotalea |
| Species | Planktotalea frisia |
| Strain | SH6-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950073 bp
Thymine Count
948589 bp
Guanine Count
1104133 bp
Cytosine Count
1103941 bp
Genome Length
4106736 bp
Protein-coding Genes
4102 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidyl-prolyl cis-trans isomerase a precursor | PFRI_39660 | Not Available | Positive | 3902149 - 3902655 | 18249.5 |
| peptidyl-prolyl cis-trans isomerase b | PFRI_39670 | Not Available | Positive | 3902648 - 3903196 | 18972.5 |
| hypothetical protein | PFRI_39680 | Not Available | Positive | 3903288 - 3904253 | 35605.0 |
| hypothetical protein | PFRI_39690 | Not Available | Negative | 3904315 - 3905157 | 29241.3 |
| tyrosine--trna ligase | PFRI_39700 | Not Available | Negative | 3905161 - 3906414 | 45780.8 |
| anhydro-n-acetylmuramic acid kinase | PFRI_39710 | Not Available | Positive | 3906479 - 3907594 | 39048.6 |
| antilisterial bacteriocin subtilosin biosynthesis protein alba | PFRI_39720 | Not Available | Negative | 3907676 - 3908629 | 35223.0 |
| glucose-6-phosphate 1-dehydrogenase | PFRI_39730 | Not Available | Positive | 3908832 - 3910286 | 53894.3 |
| 6-phosphogluconolactonase | PFRI_39740 | Not Available | Positive | 3910283 - 3910954 | 24195.3 |
| glucose-6-phosphate isomerase | PFRI_39750 | Not Available | Positive | 3910967 - 3912562 | 57586.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
