Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktotalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktotalea |
| Species | Planktotalea frisia |
| Strain | SH6-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950073 bp
Thymine Count
948589 bp
Guanine Count
1104133 bp
Cytosine Count
1103941 bp
Genome Length
4106736 bp
Protein-coding Genes
4102 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PFRI_39160 | Not Available | Positive | 3846323 - 3846574 | 9398.68 |
| sarcosine oxidase subunit delta | PFRI_39170 | Not Available | Positive | 3846568 - 3846897 | 12574.7 |
| sarcosine oxidase subunit alpha | PFRI_39180 | Not Available | Positive | 3846894 - 3849911 | 108762.0 |
| sarcosine oxidase subunit gamma | PFRI_39190 | Not Available | Positive | 3849904 - 3850470 | 20156.3 |
| superoxide dismutase | PFRI_39200 | Not Available | Positive | 3850582 - 3851181 | 22134.8 |
| log family protein orf6 in fasciation locus | PFRI_39210 | Not Available | Negative | 3851294 - 3851833 | 19516.7 |
| lysm domain/bon superfamily protein | PFRI_39220 | Not Available | Positive | 3851933 - 3853258 | 45995.4 |
| putative multidrug export atp-binding/permease protein | PFRI_39230 | Not Available | Positive | 3853323 - 3855137 | 66278.2 |
| hypothetical protein | PFRI_39240 | Not Available | Positive | 3855134 - 3855679 | 19930.7 |
| multidrug export protein acrf | PFRI_39250 | Not Available | Negative | 3855718 - 3859317 | 129812.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
