Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktotalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktotalea |
| Species | Planktotalea frisia |
| Strain | SH6-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950073 bp
Thymine Count
948589 bp
Guanine Count
1104133 bp
Cytosine Count
1103941 bp
Genome Length
4106736 bp
Protein-coding Genes
4102 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chorismate synthase | PFRI_38960 | Not Available | Positive | 3829597 - 3830700 | 39134.5 |
| phosphoserine phosphatase | PFRI_38970 | Not Available | Negative | 3830776 - 3831657 | 30844.0 |
| tyrosine recombinase xerc | PFRI_38980 | Not Available | Negative | 3831854 - 3832819 | 35587.0 |
| hypothetical protein | PFRI_38990 | Not Available | Negative | 3832982 - 3833188 | 7743.23 |
| hypothetical protein | PFRI_39000 | Not Available | Positive | 3833279 - 3833686 | 15018.9 |
| hypothetical protein | PFRI_39010 | Not Available | Positive | 3833700 - 3833969 | 10313.6 |
| hypothetical protein | PFRI_39020 | Not Available | Positive | 3834375 - 3834680 | 11355.3 |
| eama-like transporter family protein | PFRI_39030 | Not Available | Positive | 3834677 - 3835594 | 32962.4 |
| iron-sulfur cluster insertion protein erpa | PFRI_39040 | Not Available | Negative | 3835597 - 3835920 | 11214.2 |
| deoxyguanosinetriphosphate triphosphohydrolase | PFRI_39050 | Not Available | Positive | 3835998 - 3837134 | 42569.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
