Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktotalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktotalea |
| Species | Planktotalea frisia |
| Strain | SH6-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950073 bp
Thymine Count
948589 bp
Guanine Count
1104133 bp
Cytosine Count
1103941 bp
Genome Length
4106736 bp
Protein-coding Genes
4102 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative glutamine abc transporter permease protein glnm | PFRI_03390 | Not Available | Negative | 342560 - 343372 | 30082.6 |
| glutamine transport atp-binding protein glnq | PFRI_03400 | Not Available | Negative | 343376 - 344146 | 28722.9 |
| hypothetical protein | PFRI_03410 | Not Available | Positive | 344344 - 345456 | 39983.3 |
| glycine cleavage system transcriptional activator | PFRI_03420 | Not Available | Negative | 345487 - 346380 | 32648.1 |
| toluene-4-sulfonate monooxygenase system iron-sulfur subunit tsam1 | PFRI_03430 | Not Available | Positive | 346526 - 347542 | 38283.4 |
| carboxymuconolactone decarboxylase family protein | PFRI_03440 | Not Available | Negative | 347718 - 348056 | 12278.9 |
| creatinine amidohydrolase | PFRI_03450 | Not Available | Positive | 348084 - 348392 | 10630.9 |
| methylated-dna--protein-cysteine methyltransferase | PFRI_03460 | Not Available | Positive | 348449 - 349057 | 22395.7 |
| hth-type transcriptional regulator hmrr | PFRI_03470 | Not Available | Negative | 349217 - 349609 | 14690.4 |
| glutaredoxin 3 | PFRI_03480 | Not Available | Positive | 349702 - 350451 | 27564.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
