Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktotalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktotalea |
| Species | Planktotalea frisia |
| Strain | SH6-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950073 bp
Thymine Count
948589 bp
Guanine Count
1104133 bp
Cytosine Count
1103941 bp
Genome Length
4106736 bp
Protein-coding Genes
4102 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-n-acetyl-2-amino-2-deoxy-d-glucuronate oxidase | PFRI_38470 | Not Available | Positive | 3780260 - 3781207 | 34695.0 |
| udp-2-acetamido-3-amino-2, 3-dideoxy-d-glucuronate n-acetyltransferase | PFRI_38480 | Not Available | Positive | 3781204 - 3781794 | 20691.8 |
| udp-2-acetamido-2-deoxy-3-oxo-d-glucuronate aminotransferase | PFRI_38490 | Not Available | Positive | 3781798 - 3782919 | 40476.6 |
| putative glycosyl transferase | PFRI_38500 | Not Available | Positive | 3782924 - 3784186 | 47754.5 |
| putative sugar transferase epsl | PFRI_38510 | Not Available | Positive | 3784183 - 3784755 | 21342.7 |
| putative acetyltransferase epsm | PFRI_38520 | Not Available | Positive | 3784752 - 3785348 | 19821.6 |
| dtdp-3-amino-3,6-dideoxy-alpha-d- galactopyranose transaminase | PFRI_38530 | Not Available | Positive | 3785352 - 3786509 | 41738.8 |
| cupin domain protein | PFRI_38540 | Not Available | Negative | 3787318 - 3787764 | 15505.1 |
| glycine cleavage system transcriptional activator | PFRI_38550 | Not Available | Positive | 3787879 - 3788814 | 34833.8 |
| 2-iminobutanoate/2-iminopropanoate deaminase | PFRI_38560 | Not Available | Negative | 3788984 - 3789349 | 12607.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
