Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktotalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktotalea |
| Species | Planktotalea frisia |
| Strain | SH6-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950073 bp
Thymine Count
948589 bp
Guanine Count
1104133 bp
Cytosine Count
1103941 bp
Genome Length
4106736 bp
Protein-coding Genes
4102 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iv secretion system protein virb4 | PFRI_37970 | Not Available | Positive | 3738291 - 3740666 | 88473.3 |
| hypothetical protein | PFRI_37980 | Not Available | Positive | 3740663 - 3740830 | 5757.96 |
| soluble lytic murein transglycosylase precursor | PFRI_37990 | Not Available | Positive | 3740820 - 3741974 | 41021.6 |
| hypothetical protein | PFRI_38000 | Not Available | Positive | 3741974 - 3742429 | 16974.8 |
| hypothetical protein | PFRI_38010 | Not Available | Negative | 3742507 - 3742668 | 5908.09 |
| acetyltransferase (gnat) family protein | PFRI_38020 | Not Available | Positive | 3742790 - 3743266 | 18083.4 |
| hypothetical protein | PFRI_38030 | Not Available | Positive | 3743569 - 3743685 | 4253.09 |
| high-affinity zinc uptake system membrane protein znub | PFRI_38040 | Not Available | Negative | 3743801 - 3744595 | 27236.3 |
| zinc import atp-binding protein znuc | PFRI_38050 | Not Available | Negative | 3744595 - 3745344 | 26468.9 |
| zinc uptake regulation protein | PFRI_38060 | Not Available | Negative | 3745341 - 3745856 | 18256.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
