Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktotalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktotalea |
| Species | Planktotalea frisia |
| Strain | SH6-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950073 bp
Thymine Count
948589 bp
Guanine Count
1104133 bp
Cytosine Count
1103941 bp
Genome Length
4106736 bp
Protein-coding Genes
4102 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hth-type transcriptional regulator benm | PFRI_03290 | Not Available | Negative | 332111 - 332995 | 32605.2 |
| 3-isopropylmalate dehydratase small subunit | PFRI_03300 | Not Available | Negative | 333015 - 333635 | 22584.0 |
| 3-isopropylmalate dehydratase large subunit | PFRI_03310 | Not Available | Negative | 333632 - 335011 | 49068.3 |
| fluoroacetate dehalogenase | PFRI_03320 | Not Available | Negative | 335008 - 335913 | 33330.4 |
| c4-dicarboxylate-binding periplasmic protein precursor | PFRI_03330 | Not Available | Positive | 336094 - 337095 | 36829.6 |
| 2,3-diketo-l-gulonate trap transporter small permease protein yiam | PFRI_03340 | Not Available | Positive | 337166 - 337849 | 25285.9 |
| sialic acid trap transporter permease protein siat | PFRI_03350 | Not Available | Positive | 337853 - 339664 | 63669.3 |
| n-alpha-acetyl-l-2,4-diaminobutyric acid deacetylase | PFRI_03360 | Not Available | Positive | 340168 - 340746 | 20521.5 |
| putative glutamine abc transporter permease protein glnm | PFRI_03370 | Not Available | Negative | 340743 - 341612 | 33199.4 |
| cystine-binding periplasmic protein precursor | PFRI_03380 | Not Available | Negative | 341692 - 342525 | 30246.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
