Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktotalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktotalea |
| Species | Planktotalea frisia |
| Strain | SH6-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950073 bp
Thymine Count
948589 bp
Guanine Count
1104133 bp
Cytosine Count
1103941 bp
Genome Length
4106736 bp
Protein-coding Genes
4102 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| leucine/isoleucine/valine transporter permease subunit | PFRI_37370 | Not Available | Positive | 3680872 - 3682176 | 46114.1 |
| d-beta-hydroxybutyrate dehydrogenase | PFRI_37380 | Not Available | Negative | 3682287 - 3683060 | 27104.6 |
| nickel-binding periplasmic protein precursor | PFRI_37390 | Not Available | Positive | 3683390 - 3685210 | 67823.2 |
| signal transduction histidine-protein kinase bara | PFRI_37400 | Not Available | Positive | 3685716 - 3687914 | 82111.5 |
| hypothetical protein | PFRI_37410 | Not Available | Negative | 3687902 - 3688672 | 28859.5 |
| atp-dependent dna helicase recq | PFRI_37420 | Not Available | Negative | 3688702 - 3690747 | 74140.6 |
| yggt family protein | PFRI_37430 | Not Available | Negative | 3690824 - 3691111 | 11001.9 |
| hypothetical protein | PFRI_37440 | Not Available | Positive | 3691241 - 3691777 | 20690.2 |
| vacuole effluxer atg22 like protein | PFRI_37450 | Not Available | Positive | 3691846 - 3693219 | 49256.4 |
| penicillin-insensitive murein endopeptidase precursor | PFRI_37460 | Not Available | Positive | 3693216 - 3694082 | 31844.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
