Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktotalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktotalea |
| Species | Planktotalea frisia |
| Strain | SH6-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950073 bp
Thymine Count
948589 bp
Guanine Count
1104133 bp
Cytosine Count
1103941 bp
Genome Length
4106736 bp
Protein-coding Genes
4102 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c | PFRI_37170 | Not Available | Positive | 3661991 - 3662404 | 14698.9 |
| proofreading thioesterase enth | PFRI_37180 | Not Available | Negative | 3662405 - 3662809 | 14268.2 |
| hypothetical protein | PFRI_37190 | Not Available | Negative | 3663134 - 3663931 | 30908.7 |
| dna topoisomerase 4 subunit b | PFRI_37200 | Not Available | Negative | 3663928 - 3665883 | 71486.3 |
| carboxymuconolactone decarboxylase family protein | PFRI_37210 | Not Available | Positive | 3666018 - 3666626 | 22637.8 |
| glycolipid sulfotransferase | PFRI_37220 | Not Available | Positive | 3666689 - 3667573 | 32990.4 |
| hypothetical protein | PFRI_37230 | Not Available | Positive | 3667546 - 3667644 | 3706.78 |
| alkaline phosphatase synthesis sensor protein phor | PFRI_37240 | Not Available | Negative | 3668447 - 3669484 | 38147.8 |
| cystathionine beta-lyase metc | PFRI_37250 | Not Available | Negative | 3669487 - 3670671 | 41109.8 |
| 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-acetyltransferase | PFRI_37260 | Not Available | Negative | 3670675 - 3671196 | 18477.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
