Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktotalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktotalea |
| Species | Planktotalea frisia |
| Strain | SH6-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950073 bp
Thymine Count
948589 bp
Guanine Count
1104133 bp
Cytosine Count
1103941 bp
Genome Length
4106736 bp
Protein-coding Genes
4102 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PFRI_36970 | Not Available | Negative | 3642289 - 3642744 | 17184.6 |
| hypothetical protein | PFRI_36980 | Not Available | Positive | 3642897 - 3643862 | 35982.3 |
| methylmalonyl-coa mutase | PFRI_36990 | Not Available | Positive | 3643828 - 3645954 | 77198.7 |
| hypothetical protein | PFRI_37000 | Not Available | Positive | 3645973 - 3646590 | 22259.4 |
| n-acyltransferase ynca | PFRI_37010 | Not Available | Positive | 3646587 - 3647087 | 18437.2 |
| dnaj-like protein djla | PFRI_37020 | Not Available | Positive | 3647130 - 3647813 | 25682.8 |
| endonuclease/exonuclease/phosphatase family protein | PFRI_37030 | Not Available | Positive | 3647813 - 3648823 | 37717.7 |
| hypothetical protein | PFRI_37040 | Not Available | Positive | 3648861 - 3649220 | 13018.7 |
| guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase | PFRI_37050 | Not Available | Negative | 3649217 - 3650782 | 57380.6 |
| polyphosphate kinase | PFRI_37060 | Not Available | Negative | 3650799 - 3652979 | 81136.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
