Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktotalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktotalea |
| Species | Planktotalea frisia |
| Strain | SH6-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950073 bp
Thymine Count
948589 bp
Guanine Count
1104133 bp
Cytosine Count
1103941 bp
Genome Length
4106736 bp
Protein-coding Genes
4102 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| serine hydroxymethyltransferase | PFRI_36770 | Not Available | Negative | 3620548 - 3621864 | 46202.4 |
| glycine cleavage system transcriptional activator | PFRI_36780 | Not Available | Positive | 3621963 - 3622841 | 31444.6 |
| potassium transporter peripheral membrane component | PFRI_36790 | Not Available | Negative | 3622838 - 3624610 | 62025.8 |
| putative transcriptional regulatory protein | PFRI_36800 | Not Available | Positive | 3624734 - 3625474 | 27017.6 |
| riboflavin transporter | PFRI_36810 | Not Available | Positive | 3625668 - 3626570 | 32697.4 |
| hth-type transcriptional regulator beti | PFRI_36820 | Not Available | Positive | 3626647 - 3627228 | 21176.7 |
| choline-sulfatase | PFRI_36830 | Not Available | Positive | 3627228 - 3628736 | 57879.1 |
| nad/nadp-dependent betaine aldehyde dehydrogenase | PFRI_36840 | Not Available | Positive | 3628777 - 3630234 | 51839.6 |
| oxygen-dependent choline dehydrogenase | PFRI_36850 | Not Available | Positive | 3630277 - 3631950 | 60835.0 |
| succinoglycan biosynthesis protein exoi | PFRI_36860 | Not Available | Positive | 3632097 - 3632747 | 24192.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
