Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktotalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktotalea |
| Species | Planktotalea frisia |
| Strain | SH6-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950073 bp
Thymine Count
948589 bp
Guanine Count
1104133 bp
Cytosine Count
1103941 bp
Genome Length
4106736 bp
Protein-coding Genes
4102 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetyltransferase (gnat) family protein | PFRI_36570 | Not Available | Positive | 3602432 - 3602923 | 17612.6 |
| bacterial sh3 domain protein | PFRI_36580 | Not Available | Negative | 3602979 - 3603359 | 14188.0 |
| inner membrane protein ybhl | PFRI_36590 | Not Available | Negative | 3603600 - 3604376 | 27706.4 |
| hypothetical protein | PFRI_36600 | Not Available | Negative | 3604555 - 3604782 | 8407.24 |
| hth-type transcriptional regulator gltc | PFRI_36610 | Not Available | Positive | 3604907 - 3605803 | 32816.7 |
| hypothetical protein | PFRI_36620 | Not Available | Positive | 3605933 - 3607162 | 44421.1 |
| phthiocerol synthesis polyketide synthase type i ppsc | PFRI_36630 | Not Available | Negative | 3607211 - 3608185 | 34405.7 |
| transcriptional repressor dica | PFRI_36640 | Not Available | Positive | 3608484 - 3608867 | 14383.0 |
| histidinol-phosphatase | PFRI_36650 | Not Available | Positive | 3608938 - 3609750 | 28774.1 |
| 8-oxoguanine deaminase | PFRI_36660 | Not Available | Positive | 3609880 - 3611226 | 47884.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
