Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktotalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktotalea |
| Species | Planktotalea frisia |
| Strain | SH6-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950073 bp
Thymine Count
948589 bp
Guanine Count
1104133 bp
Cytosine Count
1103941 bp
Genome Length
4106736 bp
Protein-coding Genes
4102 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-invertase hin | PFRI_36070 | Not Available | Positive | 3557824 - 3558378 | 20443.1 |
| hypothetical protein | PFRI_36080 | Not Available | Positive | 3558670 - 3559092 | 16391.9 |
| hypothetical protein | PFRI_36090 | Not Available | Positive | 3559097 - 3559573 | 17900.0 |
| hypothetical protein | PFRI_36100 | Not Available | Negative | 3560213 - 3560671 | 16997.5 |
| hypothetical protein | PFRI_36110 | Not Available | Negative | 3560755 - 3561072 | 11733.2 |
| phage integrase family protein | PFRI_36120 | Not Available | Negative | 3561341 - 3562198 | 32682.3 |
| transposase | PFRI_36130 | Not Available | Positive | 3562201 - 3562452 | 9071.77 |
| acetylornithine deacetylase | PFRI_36140 | Not Available | Positive | 3562601 - 3563767 | 41957.1 |
| hypothetical protein | PFRI_36150 | Not Available | Negative | 3563813 - 3563905 | 3207.92 |
| phenylserine dehydratase | PFRI_36160 | Not Available | Negative | 3563902 - 3564879 | 34341.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
