Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktotalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktotalea |
| Species | Planktotalea frisia |
| Strain | SH6-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950073 bp
Thymine Count
948589 bp
Guanine Count
1104133 bp
Cytosine Count
1103941 bp
Genome Length
4106736 bp
Protein-coding Genes
4102 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pseudouridine kinase | PFRI_03090 | Not Available | Negative | 316308 - 317204 | 30878.0 |
| nickel uptake substrate-specific transmembrane region | PFRI_03100 | Not Available | Negative | 317242 - 318051 | 29937.7 |
| hypothetical protein | PFRI_03110 | Not Available | Positive | 318053 - 319195 | 40847.8 |
| hypothetical protein | PFRI_03120 | Not Available | Negative | 319198 - 319830 | 23502.2 |
| methionine synthase | PFRI_03130 | Not Available | Negative | 319903 - 320601 | 25029.3 |
| bifunctional homocysteine s-methyltransferase/5,10-methylenetetrahydrofolate reductase | PFRI_03140 | Not Available | Negative | 320737 - 321753 | 35525.3 |
| phosphatidylglycerol lysyltransferase | PFRI_03150 | Not Available | Negative | 321849 - 322652 | 29856.9 |
| 50s ribosomal protein l7/l12 | PFRI_03160 | Not Available | Negative | 323042 - 323419 | 12819.5 |
| 50s ribosomal protein l10 | PFRI_03170 | Not Available | Negative | 323494 - 324009 | 17606.1 |
| 50s ribosomal protein l1 | PFRI_03180 | Not Available | Negative | 324279 - 324977 | 23953.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
