Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktotalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktotalea |
| Species | Planktotalea frisia |
| Strain | SH6-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950073 bp
Thymine Count
948589 bp
Guanine Count
1104133 bp
Cytosine Count
1103941 bp
Genome Length
4106736 bp
Protein-coding Genes
4102 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PFRI_35370 | Not Available | Positive | 3499634 - 3500167 | 20221.9 |
| pyrroline-5-carboxylate reductase | PFRI_35380 | Not Available | Positive | 3500198 - 3501010 | 27314.0 |
| pp_03506 | PFRI_35390 | Not Available | Positive | 3501003 - 3501341 | Not Available |
| glycerate dehydrogenase | PFRI_35400 | Not Available | Positive | 3501341 - 3502288 | 33424.7 |
| thymidine kinase | PFRI_35410 | Not Available | Negative | 3502285 - 3502863 | 21639.0 |
| hypothetical protein | PFRI_35420 | Not Available | Positive | 3503179 - 3503637 | 16796.0 |
| 3-oxoacyl-[acyl-carrier-protein] reductase fabg | PFRI_35430 | Not Available | Negative | 3503716 - 3504438 | 25093.8 |
| acetyl-coa acetyltransferase | PFRI_35440 | Not Available | Negative | 3504573 - 3505748 | 40880.8 |
| cyclic di-gmp phosphodiesterase gmr | PFRI_35450 | Not Available | Negative | 3505940 - 3506191 | 9164.75 |
| cyclic di-gmp phosphodiesterase yfgf | PFRI_35460 | Not Available | Negative | 3506198 - 3506830 | 23927.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
