Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktotalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktotalea |
| Species | Planktotalea frisia |
| Strain | SH6-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950073 bp
Thymine Count
948589 bp
Guanine Count
1104133 bp
Cytosine Count
1103941 bp
Genome Length
4106736 bp
Protein-coding Genes
4102 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding transcriptional regulator csir | PFRI_34670 | Not Available | Positive | 3430070 - 3430735 | 25020.1 |
| 3-(3-hydroxy-phenyl)propionate/3- hydroxycinnamic acid hydroxylase | PFRI_34680 | Not Available | Positive | 3430736 - 3432304 | 58234.1 |
| arylsulfatase | PFRI_34690 | Not Available | Negative | 3432308 - 3433918 | 61064.8 |
| glutathione s-transferase gst-6.0 | PFRI_34700 | Not Available | Negative | 3433949 - 3434638 | 25700.1 |
| hypothetical protein | PFRI_34710 | Not Available | Positive | 3434766 - 3435809 | 36041.7 |
| dctm-like transporter | PFRI_34720 | Not Available | Positive | 3435871 - 3438213 | 83861.7 |
| hydrogen cyanide synthase subunit hcnc precursor | PFRI_34730 | Not Available | Negative | 3438205 - 3439341 | 40365.0 |
| udp-glucose 4-epimerase | PFRI_34740 | Not Available | Positive | 3439485 - 3440372 | 33139.3 |
| pantothenate kinase | PFRI_34750 | Not Available | Negative | 3440369 - 3440974 | 22582.1 |
| acetylornithine deacetylase | PFRI_34760 | Not Available | Negative | 3441009 - 3442166 | 41662.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
