Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktotalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktotalea |
| Species | Planktotalea frisia |
| Strain | SH6-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950073 bp
Thymine Count
948589 bp
Guanine Count
1104133 bp
Cytosine Count
1103941 bp
Genome Length
4106736 bp
Protein-coding Genes
4102 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PFRI_34570 | Not Available | Negative | 3420559 - 3421839 | 45353.2 |
| 2,4-dichlorophenol 6-monooxygenase | PFRI_34580 | Not Available | Negative | 3421888 - 3423642 | 63779.1 |
| hydroxyquinol 1,2-dioxygenase | PFRI_34590 | Not Available | Negative | 3423672 - 3424541 | 31731.3 |
| sialic acid trap transporter permease protein siat | PFRI_34600 | Not Available | Negative | 3424553 - 3425857 | 46534.1 |
| tripartite atp-independent periplasmic transporter, dctq component | PFRI_34610 | Not Available | Negative | 3425854 - 3426399 | 20003.0 |
| bacterial extracellular solute-binding protein, family 7 | PFRI_34620 | Not Available | Negative | 3426430 - 3427503 | 38067.5 |
| osmc-like protein | PFRI_34630 | Not Available | Negative | 3427550 - 3428008 | 16582.1 |
| putative malonic semialdehyde reductase rute | PFRI_34640 | Not Available | Negative | 3428021 - 3428686 | 24292.0 |
| ureidoglycolate lyase | PFRI_34650 | Not Available | Negative | 3428683 - 3429552 | 30475.4 |
| ycii-like protein | PFRI_34660 | Not Available | Positive | 3429639 - 3430025 | 13692.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
