Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktotalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktotalea |
| Species | Planktotalea frisia |
| Strain | SH6-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950073 bp
Thymine Count
948589 bp
Guanine Count
1104133 bp
Cytosine Count
1103941 bp
Genome Length
4106736 bp
Protein-coding Genes
4102 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| manganese-dependent 2,3-dihydroxybiphenyl 1,2-dioxygenase | PFRI_33780 | Not Available | Positive | 3343909 - 3344892 | 37507.2 |
| l-2,4-diaminobutyrate decarboxylase | PFRI_33790 | Not Available | Positive | 3344908 - 3346305 | 51907.8 |
| ureidoglycolate lyase | PFRI_33800 | Not Available | Positive | 3346302 - 3347159 | 31377.2 |
| 2-hydroxyhexa-2,4-dienoate hydratase | PFRI_33810 | Not Available | Positive | 3347156 - 3347956 | 28377.8 |
| 2-keto-3-deoxy-l-rhamnonate aldolase | PFRI_33820 | Not Available | Positive | 3347969 - 3348748 | 26724.3 |
| cysteine-rich secretory protein family protein | PFRI_33830 | Not Available | Positive | 3348975 - 3349553 | 20078.3 |
| Trna-ala | Not Available | Not Available | Positive | 3349866 - 3349941 | Not Available |
| hypothetical protein | PFRI_33840 | Not Available | Negative | 3350036 - 3350368 | 12103.5 |
| hypothetical protein | PFRI_33850 | Not Available | Positive | 3350474 - 3351160 | 25468.6 |
| hth-type transcriptional regulator mcbr | PFRI_33860 | Not Available | Positive | 3351200 - 3351850 | 24149.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
