Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktotalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktotalea |
| Species | Planktotalea frisia |
| Strain | SH6-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950073 bp
Thymine Count
948589 bp
Guanine Count
1104133 bp
Cytosine Count
1103941 bp
Genome Length
4106736 bp
Protein-coding Genes
4102 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleoid occlusion protein | PFRI_33680 | Not Available | Positive | 3333409 - 3334515 | 40732.1 |
| chrr cupin-like domain protein | PFRI_33690 | Not Available | Positive | 3334628 - 3335296 | 24331.6 |
| putrescine oxidase | PFRI_33700 | Not Available | Positive | 3335296 - 3336351 | 38465.5 |
| homoserine kinase | PFRI_33710 | Not Available | Negative | 3336326 - 3337255 | 35411.2 |
| 5-aminovalerate aminotransferase davt | PFRI_33720 | Not Available | Negative | 3337252 - 3338532 | 46754.8 |
| taurine--pyruvate aminotransferase | PFRI_33730 | Not Available | Negative | 3338529 - 3339875 | 48131.5 |
| aldehyde dehydrogenase puuc | PFRI_33740 | Not Available | Positive | 3339988 - 3341472 | 51594.2 |
| transcriptional regulator slya | PFRI_33750 | Not Available | Negative | 3341462 - 3341908 | 16790.3 |
| 5-carboxymethyl-2-hydroxymuconate delta-isomerase | PFRI_33760 | Not Available | Positive | 3342012 - 3342401 | 14074.0 |
| 2-aminomuconic 6-semialdehyde dehydrogenase | PFRI_33770 | Not Available | Positive | 3342398 - 3343909 | 54510.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
