Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktotalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktotalea |
| Species | Planktotalea frisia |
| Strain | SH6-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950073 bp
Thymine Count
948589 bp
Guanine Count
1104133 bp
Cytosine Count
1103941 bp
Genome Length
4106736 bp
Protein-coding Genes
4102 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PFRI_33580 | Not Available | Negative | 3324736 - 3325314 | 20886.9 |
| p-hydroxyphenylacetate 3-hydroxylase, reductase component | PFRI_33590 | Not Available | Negative | 3325311 - 3325802 | 17381.0 |
| glutathione s-transferase gst-6.0 | PFRI_33600 | Not Available | Positive | 3326028 - 3326648 | 23049.8 |
| n-alpha-acetyl-l-2,4-diaminobutyric acid deacetylase | PFRI_33610 | Not Available | Negative | 3327428 - 3327763 | 11762.1 |
| fatty acid desaturase | PFRI_33620 | Not Available | Positive | 3327951 - 3328925 | 38022.3 |
| naphthalene 1,2-dioxygenase system ferredoxin subunit | PFRI_33630 | Not Available | Positive | 3328915 - 3329232 | 11345.6 |
| res domain protein | PFRI_33640 | Not Available | Negative | 3329234 - 3329920 | 25325.7 |
| hypothetical protein | PFRI_33650 | Not Available | Negative | 3329917 - 3330252 | 12815.5 |
| initiator replication protein | PFRI_33660 | Not Available | Negative | 3330353 - 3331534 | 44102.8 |
| sporulation initiation inhibitor protein soj | PFRI_33670 | Not Available | Positive | 3332025 - 3333422 | 51912.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
