Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktotalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktotalea |
| Species | Planktotalea frisia |
| Strain | SH6-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950073 bp
Thymine Count
948589 bp
Guanine Count
1104133 bp
Cytosine Count
1103941 bp
Genome Length
4106736 bp
Protein-coding Genes
4102 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| caffeine dehydrogenase subunit beta | PFRI_33480 | Not Available | Positive | 3313745 - 3314566 | 29306.4 |
| caffeine dehydrogenase subunit gamma | PFRI_33490 | Not Available | Positive | 3314563 - 3315039 | 16603.8 |
| caffeine dehydrogenase subunit alpha | PFRI_33500 | Not Available | Positive | 3315036 - 3317417 | 85203.8 |
| bacterial extracellular solute-binding protein, family 7 | PFRI_33510 | Not Available | Negative | 3317492 - 3318559 | 38031.9 |
| tripartite atp-independent periplasmic transporter, dctq component | PFRI_33520 | Not Available | Positive | 3318797 - 3319318 | 19244.8 |
| ectoine trap transporter large permease protein teac | PFRI_33530 | Not Available | Positive | 3319330 - 3320649 | 46477.4 |
| limonene 1,2-monooxygenase | PFRI_33540 | Not Available | Positive | 3320734 - 3321825 | 39980.8 |
| 3-oxoadipate enol-lactonase 2 | PFRI_33550 | Not Available | Positive | 3321825 - 3322622 | 28621.6 |
| polysaccharide deacetylase | PFRI_33560 | Not Available | Positive | 3322622 - 3323503 | 33408.4 |
| fad-dependent urate hydroxylase | PFRI_33570 | Not Available | Positive | 3323567 - 3324739 | 42623.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
