Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktotalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktotalea |
| Species | Planktotalea frisia |
| Strain | SH6-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950073 bp
Thymine Count
948589 bp
Guanine Count
1104133 bp
Cytosine Count
1103941 bp
Genome Length
4106736 bp
Protein-coding Genes
4102 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PFRI_33080 | Not Available | Negative | 3274778 - 3275782 | 35363.3 |
| putative acetyltransferase | PFRI_33090 | Not Available | Negative | 3275775 - 3276236 | 16703.6 |
| hypothetical protein | PFRI_33100 | Not Available | Negative | 3276233 - 3277648 | 51572.6 |
| trna pseudouridine synthase a | PFRI_33110 | Not Available | Positive | 3277725 - 3278537 | 29941.8 |
| hypothetical protein | PFRI_33120 | Not Available | Negative | 3278534 - 3278974 | 14880.8 |
| hypothetical protein | PFRI_33130 | Not Available | Negative | 3278978 - 3280630 | 61044.4 |
| membrane dipeptidase | PFRI_33140 | Not Available | Negative | 3280627 - 3281610 | 36716.3 |
| pp_03282 | PFRI_33150 | Not Available | Negative | 3281707 - 3282156 | Not Available |
| ribosomal large subunit pseudouridine synthase b | PFRI_33160 | Not Available | Positive | 3282210 - 3283265 | 38649.8 |
| hypothetical protein | PFRI_33170 | Not Available | Positive | 3283582 - 3284715 | 42256.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
