Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktotalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktotalea |
| Species | Planktotalea frisia |
| Strain | SH6-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950073 bp
Thymine Count
948589 bp
Guanine Count
1104133 bp
Cytosine Count
1103941 bp
Genome Length
4106736 bp
Protein-coding Genes
4102 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PFRI_02790 | Not Available | Positive | 290088 - 290561 | 17138.7 |
| lysm domain/bon superfamily protein | PFRI_02800 | Not Available | Negative | 290614 - 291060 | 15549.3 |
| multidrug resistance abc transporter atp-binding/permease protein bmra | PFRI_02810 | Not Available | Negative | 291128 - 292948 | 65345.4 |
| Trna-gly | Not Available | Not Available | Positive | 293056 - 293130 | Not Available |
| hypothetical protein | PFRI_02830 | Not Available | Positive | 293328 - 293714 | 13300.3 |
| putative sos response-associated peptidase yedk | PFRI_02840 | Not Available | Negative | 293711 - 294358 | 23680.3 |
| nad(p)h dehydrogenase (quinone) | PFRI_02850 | Not Available | Positive | 294490 - 295026 | 19075.7 |
| trifunctional nucleotide phosphoesterase protein yfkn precursor | PFRI_02860 | Not Available | Negative | 295062 - 296621 | 54543.6 |
| hypothetical protein | PFRI_02870 | Not Available | Positive | 296742 - 297440 | 26156.4 |
| hypothetical protein | PFRI_02880 | Not Available | Positive | 297413 - 297811 | 14822.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
