Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktotalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktotalea |
| Species | Planktotalea frisia |
| Strain | SH6-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950073 bp
Thymine Count
948589 bp
Guanine Count
1104133 bp
Cytosine Count
1103941 bp
Genome Length
4106736 bp
Protein-coding Genes
4102 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| photosynthetic apparatus regulatory protein rega | PFRI_32680 | Not Available | Negative | 3234604 - 3235158 | 20205.1 |
| sco1/senc | PFRI_32690 | Not Available | Negative | 3235233 - 3235853 | 22909.1 |
| sensor histidine kinase regb | PFRI_32700 | Not Available | Positive | 3235971 - 3237371 | 51397.5 |
| sensor protein divl | PFRI_32710 | Not Available | Positive | 3237451 - 3238740 | 48888.6 |
| hypothetical protein | PFRI_32720 | Not Available | Positive | 3238840 - 3239430 | 21688.5 |
| flagellar motor switch protein flin | PFRI_32730 | Not Available | Positive | 3239420 - 3239701 | 10177.1 |
| flagellar biosynthetic protein flip precursor | PFRI_32740 | Not Available | Positive | 3239698 - 3240429 | 26557.5 |
| oxygen-dependent coproporphyrinogen-iii oxidase | PFRI_32750 | Not Available | Negative | 3240432 - 3241325 | 33363.1 |
| gluconate 5-dehydrogenase | PFRI_32760 | Not Available | Negative | 3241362 - 3242162 | 28382.6 |
| ribosomal rna small subunit methyltransferase c | PFRI_32770 | Not Available | Negative | 3242211 - 3243203 | 36005.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
