Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktotalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktotalea |
| Species | Planktotalea frisia |
| Strain | SH6-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950073 bp
Thymine Count
948589 bp
Guanine Count
1104133 bp
Cytosine Count
1103941 bp
Genome Length
4106736 bp
Protein-coding Genes
4102 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna-binding protein hfq | PFRI_31890 | Not Available | Positive | 3162268 - 3162507 | 8991.88 |
| gtpase hflx | PFRI_31900 | Not Available | Positive | 3162507 - 3163778 | 46963.2 |
| acyl-homoserine lactone acylase quip precursor | PFRI_31910 | Not Available | Negative | 3163825 - 3166296 | 90349.5 |
| 2-hydroxy-3-oxopropionate reductase | PFRI_31920 | Not Available | Positive | 3166405 - 3167277 | 30479.0 |
| multidrug transporter emre | PFRI_31930 | Not Available | Negative | 3167281 - 3167616 | 12056.2 |
| leucine-responsive regulatory protein | PFRI_31940 | Not Available | Negative | 3167629 - 3168114 | 18150.0 |
| hypothetical protein | PFRI_31950 | Not Available | Positive | 3168205 - 3168411 | 7654.34 |
| amidohydrolase egtc | PFRI_31960 | Not Available | Positive | 3168415 - 3169209 | 29248.6 |
| poly(beta-d-mannuronate) c5 epimerase 5 | PFRI_31970 | Not Available | Negative | 3169237 - 3170742 | 51549.3 |
| hypothetical protein | PFRI_31980 | Not Available | Positive | 3171664 - 3172041 | 14532.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
