Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktotalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktotalea |
| Species | Planktotalea frisia |
| Strain | SH6-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950073 bp
Thymine Count
948589 bp
Guanine Count
1104133 bp
Cytosine Count
1103941 bp
Genome Length
4106736 bp
Protein-coding Genes
4102 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hemolysin c | PFRI_02690 | Not Available | Positive | 278646 - 279548 | 32963.1 |
| apolipoprotein n-acyltransferase | PFRI_02700 | Not Available | Positive | 279552 - 281012 | 52990.7 |
| s-adenosylmethionine synthase | PFRI_02710 | Not Available | Positive | 281098 - 282279 | 42454.9 |
| hypothetical protein | PFRI_02720 | Not Available | Positive | 282417 - 282812 | 14354.3 |
| tryptophan 2,3-dioxygenase | PFRI_02730 | Not Available | Negative | 282803 - 283633 | 32420.8 |
| tetracycline resistance protein, class c | PFRI_02740 | Not Available | Positive | 283766 - 284977 | 42728.1 |
| s-(hydroxymethyl)mycothiol dehydrogenase | PFRI_02750 | Not Available | Positive | 285055 - 286140 | 36992.6 |
| d-galactonate dehydratase | PFRI_02760 | Not Available | Positive | 286137 - 287369 | 44598.3 |
| long-chain-fatty-acid--coa ligase | PFRI_02770 | Not Available | Negative | 287449 - 289323 | 68073.0 |
| hypothetical protein | PFRI_02780 | Not Available | Positive | 289480 - 289758 | 10278.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
