Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktotalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktotalea |
| Species | Planktotalea frisia |
| Strain | SH6-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950073 bp
Thymine Count
948589 bp
Guanine Count
1104133 bp
Cytosine Count
1103941 bp
Genome Length
4106736 bp
Protein-coding Genes
4102 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nudix domain protein | PFRI_31090 | Not Available | Positive | 3072744 - 3073232 | 18367.5 |
| hypothetical protein | PFRI_31100 | Not Available | Positive | 3073274 - 3073717 | 15895.8 |
| c-factor | PFRI_31110 | Not Available | Positive | 3073717 - 3074358 | 22300.4 |
| aspartate kinase | PFRI_31120 | Not Available | Positive | 3074449 - 3075684 | 44254.8 |
| phosphoenolpyruvate-protein phosphotransferase | PFRI_31130 | Not Available | Positive | 3075883 - 3078129 | 81976.7 |
| ecsc protein family protein | PFRI_31140 | Not Available | Negative | 3078126 - 3078953 | 29006.1 |
| acetyltransferase (gnat) family protein | PFRI_31150 | Not Available | Negative | 3078904 - 3079389 | 17756.3 |
| flavin reductase like domain protein | PFRI_31160 | Not Available | Positive | 3079466 - 3080071 | 21747.6 |
| bicarbonate transporter bica | PFRI_31170 | Not Available | Negative | 3080087 - 3081721 | 57849.1 |
| s-methyl-5'-thioadenosine phosphorylase | PFRI_31180 | Not Available | Positive | 3081897 - 3082772 | 31374.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
