Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktotalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktotalea |
| Species | Planktotalea frisia |
| Strain | SH6-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950073 bp
Thymine Count
948589 bp
Guanine Count
1104133 bp
Cytosine Count
1103941 bp
Genome Length
4106736 bp
Protein-coding Genes
4102 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad dependent epimerase/dehydratase family protein | PFRI_30890 | Not Available | Positive | 3051617 - 3052426 | 30118.0 |
| eama-like transporter family protein | PFRI_30900 | Not Available | Negative | 3052620 - 3053495 | 31453.6 |
| hypothetical protein | PFRI_30910 | Not Available | Negative | 3053516 - 3055129 | 59558.4 |
| dihydrofolate reductase | PFRI_30920 | Not Available | Negative | 3055485 - 3055961 | 17653.1 |
| thymidylate synthase | PFRI_30930 | Not Available | Negative | 3055965 - 3056762 | 29864.8 |
| glycerol kinase | PFRI_30940 | Not Available | Negative | 3056803 - 3058287 | 53770.9 |
| sialic acid trap transporter permease protein siat | PFRI_30950 | Not Available | Negative | 3058309 - 3059709 | 49560.5 |
| tripartite atp-independent periplasmic transporter, dctq component | PFRI_30960 | Not Available | Negative | 3059709 - 3060338 | 22897.6 |
| lactate-binding periplasmic protein precursor | PFRI_30970 | Not Available | Negative | 3060420 - 3061430 | 36545.1 |
| hth-type transcriptional regulator dega | PFRI_30980 | Not Available | Negative | 3061514 - 3062542 | 36702.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
