Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktotalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktotalea |
| Species | Planktotalea frisia |
| Strain | SH6-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950073 bp
Thymine Count
948589 bp
Guanine Count
1104133 bp
Cytosine Count
1103941 bp
Genome Length
4106736 bp
Protein-coding Genes
4102 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| capreomycidine synthase | PFRI_02290 | Not Available | Positive | 241114 - 242238 | 40902.1 |
| hypothetical protein | PFRI_02300 | Not Available | Positive | 242426 - 242980 | 19575.6 |
| hypothetical protein | PFRI_02310 | Not Available | Positive | 242984 - 243568 | 20891.0 |
| transposase | PFRI_02320 | Not Available | Negative | 244866 - 245207 | 13277.5 |
| integrase core domain protein | PFRI_02330 | Not Available | Negative | 245255 - 245866 | 24021.1 |
| hypothetical protein | PFRI_02340 | Not Available | Negative | 246326 - 246661 | 11148.7 |
| hydrogen peroxide-inducible protein activator | PFRI_02350 | Not Available | Negative | 246811 - 247713 | 32969.2 |
| acetolactate synthase | PFRI_02360 | Not Available | Positive | 247860 - 249458 | 56439.9 |
| succinyl-coa:(r)-benzylsuccinate coa-transferase subunit bbsf | PFRI_02370 | Not Available | Positive | 249442 - 250659 | 43387.7 |
| hypothetical protein | PFRI_02380 | Not Available | Positive | 250792 - 252156 | 49623.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
