Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktotalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktotalea |
| Species | Planktotalea frisia |
| Strain | SH6-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950073 bp
Thymine Count
948589 bp
Guanine Count
1104133 bp
Cytosine Count
1103941 bp
Genome Length
4106736 bp
Protein-coding Genes
4102 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putrescine-binding periplasmic protein precursor | PFRI_22380 | Not Available | Negative | 2220927 - 2222009 | 39276.4 |
| beta-alanine--pyruvate aminotransferase | PFRI_22390 | Not Available | Positive | 2222190 - 2223584 | 50424.5 |
| hypothetical protein | PFRI_22400 | Not Available | Negative | 2223598 - 2224290 | 25526.8 |
| hypothetical protein | PFRI_22410 | Not Available | Positive | 2224495 - 2225028 | 19882.9 |
| acetyltransferase (gnat) family protein | PFRI_22420 | Not Available | Negative | 2225069 - 2225527 | 16657.5 |
| 3-ketoacyl-coa thiolase | PFRI_22430 | Not Available | Positive | 2225715 - 2226884 | 40684.6 |
| acyl-coa dehydrogenase | PFRI_22440 | Not Available | Positive | 2226896 - 2228095 | 44183.6 |
| acyl-coa dehydrogenase | PFRI_22450 | Not Available | Positive | 2228092 - 2229207 | 40401.6 |
| thioesterase superfamily protein | PFRI_22460 | Not Available | Positive | 2229208 - 2229618 | 14568.5 |
| 2,3-dehydroadipyl-coa hydratase | PFRI_22470 | Not Available | Positive | 2229615 - 2230382 | 26905.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
