Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktotalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktotalea |
| Species | Planktotalea frisia |
| Strain | SH6-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950073 bp
Thymine Count
948589 bp
Guanine Count
1104133 bp
Cytosine Count
1103941 bp
Genome Length
4106736 bp
Protein-coding Genes
4102 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna threonylcarbamoyladenosine biosynthesis protein tsae | PFRI_22190 | Not Available | Negative | 2197749 - 2198222 | 17082.2 |
| Trna-leu | Not Available | Not Available | Positive | 2198696 - 2198782 | Not Available |
| dtdp-4-dehydrorhamnose reductase | PFRI_22200 | Not Available | Positive | 2198984 - 2199964 | 34900.4 |
| choline-sulfatase | PFRI_22210 | Not Available | Negative | 2199976 - 2201490 | 56828.5 |
| undecaprenyl-diphosphatase | PFRI_22220 | Not Available | Negative | 2201568 - 2202374 | 28806.2 |
| glutamate synthase small chain | PFRI_22230 | Not Available | Positive | 2202603 - 2204039 | 51762.2 |
| glutathione-dependent formaldehyde-activating enzyme | PFRI_22240 | Not Available | Positive | 2204036 - 2204464 | 15269.2 |
| glutamate synthase large chain precursor | PFRI_22250 | Not Available | Positive | 2204461 - 2208993 | 163910.0 |
| monofunctional biosynthetic peptidoglycan transglycosylase | PFRI_22260 | Not Available | Positive | 2209073 - 2209831 | 28302.3 |
| putative gst-like protein yibf | PFRI_22270 | Not Available | Positive | 2209892 - 2210557 | 25676.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
