Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktotalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktotalea |
| Species | Planktotalea frisia |
| Strain | SH6-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950073 bp
Thymine Count
948589 bp
Guanine Count
1104133 bp
Cytosine Count
1103941 bp
Genome Length
4106736 bp
Protein-coding Genes
4102 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PFRI_22090 | Not Available | Positive | 2184539 - 2185126 | 21662.8 |
| major facilitator superfamily protein | PFRI_22100 | Not Available | Negative | 2185109 - 2186170 | 37675.4 |
| atp-dependent protease atpase subunit hslu | PFRI_22110 | Not Available | Negative | 2186336 - 2187643 | 48229.7 |
| hypothetical protein | PFRI_22120 | Not Available | Negative | 2187640 - 2188710 | 38170.8 |
| atp-dependent protease subunit hslv | PFRI_22130 | Not Available | Negative | 2188707 - 2189264 | 19354.3 |
| thioredoxin | PFRI_22140 | Not Available | Negative | 2189387 - 2189707 | 11166.2 |
| atp-dependent helicase/nuclease subunit a | PFRI_22150 | Not Available | Negative | 2189780 - 2193124 | 123568.0 |
| pd-(d/e)xk nuclease superfamily protein | PFRI_22160 | Not Available | Negative | 2193121 - 2196063 | 108438.0 |
| bifunctional protein glmu | PFRI_22170 | Not Available | Negative | 2196056 - 2196751 | 25731.1 |
| phosphotransferase enzyme family protein | PFRI_22180 | Not Available | Negative | 2196727 - 2197752 | 38470.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
