Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktotalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktotalea |
| Species | Planktotalea frisia |
| Strain | SH6-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950073 bp
Thymine Count
948589 bp
Guanine Count
1104133 bp
Cytosine Count
1103941 bp
Genome Length
4106736 bp
Protein-coding Genes
4102 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| high-affinity branched-chain amino acid transport system permease protein livh | PFRI_21390 | Not Available | Negative | 2114774 - 2115787 | 36733.9 |
| sulfate/thiosulfate import atp-binding protein cysa | PFRI_21400 | Not Available | Negative | 2115824 - 2116642 | 30227.6 |
| hypothetical protein | PFRI_21410 | Not Available | Negative | 2116645 - 2117199 | 20188.3 |
| long-chain-fatty-acid--coa ligase fadd15 | PFRI_21420 | Not Available | Negative | 2117214 - 2119187 | 73142.7 |
| blue-light-activated protein | PFRI_21430 | Not Available | Positive | 2119370 - 2121286 | 69700.4 |
| transcriptional regulatory protein ompr | PFRI_21440 | Not Available | Positive | 2121283 - 2121987 | 26035.1 |
| exodeoxyribonuclease 7 large subunit | PFRI_21450 | Not Available | Negative | 2122393 - 2123943 | 56464.5 |
| phosphoribosylamine--glycine ligase | PFRI_21460 | Not Available | Positive | 2124024 - 2125286 | 43776.2 |
| hypothetical protein | PFRI_21470 | Not Available | Negative | 2125288 - 2125980 | 24748.5 |
| ferredoxin-6 | PFRI_21480 | Not Available | Negative | 2125980 - 2126303 | 11674.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
