Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktotalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktotalea |
| Species | Planktotalea frisia |
| Strain | SH6-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950073 bp
Thymine Count
948589 bp
Guanine Count
1104133 bp
Cytosine Count
1103941 bp
Genome Length
4106736 bp
Protein-coding Genes
4102 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| modulator of ftsh protease hflk | PFRI_21290 | Not Available | Negative | 2105145 - 2106041 | 32244.0 |
| dna polymerase iv | PFRI_21300 | Not Available | Positive | 2106168 - 2107421 | 45839.5 |
| n-formylglutamate amidohydrolase | PFRI_21310 | Not Available | Negative | 2107422 - 2108285 | 31554.2 |
| Trna-val | Not Available | Not Available | Positive | 2108437 - 2108511 | Not Available |
| 50s ribosomal protein l36 | PFRI_21330 | Not Available | Positive | 2108583 - 2108708 | 4954.22 |
| cytochrome p450 107b1 | PFRI_21340 | Not Available | Positive | 2108995 - 2110167 | 42998.4 |
| phenylacetate-coenzyme a ligase | PFRI_21350 | Not Available | Negative | 2110164 - 2111360 | 42525.7 |
| high-affinity branched-chain amino acid transport atp-binding protein livf | PFRI_21360 | Not Available | Negative | 2111398 - 2112222 | 30272.6 |
| hypothetical protein | PFRI_21370 | Not Available | Negative | 2112298 - 2113572 | 45689.1 |
| leucine/isoleucine/valine transporter permease subunit | PFRI_21380 | Not Available | Negative | 2113643 - 2114719 | 39350.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
