Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktotalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktotalea |
| Species | Planktotalea frisia |
| Strain | SH6-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950073 bp
Thymine Count
948589 bp
Guanine Count
1104133 bp
Cytosine Count
1103941 bp
Genome Length
4106736 bp
Protein-coding Genes
4102 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PFRI_20690 | Not Available | Positive | 2047254 - 2047511 | 9643.66 |
| phage integrase family protein | PFRI_20700 | Not Available | Positive | 2047498 - 2048574 | 41164.2 |
| Trna-cys | Not Available | Not Available | Positive | 2048637 - 2048710 | Not Available |
| protein-l-isoaspartate o-methyltransferase | PFRI_20720 | Not Available | Positive | 2048875 - 2049528 | 23172.8 |
| outer membrane efflux protein bepc precursor | PFRI_20730 | Not Available | Positive | 2049625 - 2051034 | 50236.4 |
| hypothetical protein | PFRI_20740 | Not Available | Positive | 2051158 - 2052222 | 38279.3 |
| cobyric acid synthase | PFRI_20750 | Not Available | Negative | 2052219 - 2053670 | 52035.2 |
| hypothetical protein | PFRI_20760 | Not Available | Positive | 2053729 - 2054298 | 21147.1 |
| hypothetical protein | PFRI_20770 | Not Available | Negative | 2054362 - 2054682 | 11599.5 |
| elongation factor p | PFRI_20780 | Not Available | Positive | 2054885 - 2055463 | 21562.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
