Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktotalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktotalea |
| Species | Planktotalea frisia |
| Strain | SH6-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950073 bp
Thymine Count
948589 bp
Guanine Count
1104133 bp
Cytosine Count
1103941 bp
Genome Length
4106736 bp
Protein-coding Genes
4102 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna topoisomerase 3 | PFRI_20590 | Not Available | Negative | 2039031 - 2041187 | 79437.7 |
| trbl/virb6 plasmid conjugal transfer protein | PFRI_20600 | Not Available | Negative | 2041522 - 2042520 | 34241.4 |
| type iv secretion system protein virb11 | PFRI_20610 | Not Available | Negative | 2042548 - 2043708 | 42453.3 |
| type iv secretion system protein ptlg | PFRI_20620 | Not Available | Negative | 2043712 - 2044626 | 32535.0 |
| hypothetical protein | PFRI_20630 | Not Available | Negative | 2044758 - 2045081 | 11763.1 |
| hypothetical protein | PFRI_20640 | Not Available | Positive | 2045285 - 2045524 | 8972.55 |
| hth-type transcriptional regulator sinr | PFRI_20650 | Not Available | Negative | 2045538 - 2045921 | 14287.1 |
| hypothetical protein | PFRI_20660 | Not Available | Positive | 2046077 - 2046718 | 23910.4 |
| hypothetical protein | PFRI_20670 | Not Available | Negative | 2046721 - 2047068 | 12932.8 |
| hypothetical protein | PFRI_20680 | Not Available | Positive | 2047096 - 2047257 | 5891.13 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
