Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktotalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktotalea |
| Species | Planktotalea frisia |
| Strain | SH6-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950073 bp
Thymine Count
948589 bp
Guanine Count
1104133 bp
Cytosine Count
1103941 bp
Genome Length
4106736 bp
Protein-coding Genes
4102 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tripartite tricarboxylate transporter tcta family protein | PFRI_20490 | Not Available | Positive | 2026969 - 2028492 | 53658.6 |
| 4-methylaminobutanoate oxidase (formaldehyde-forming) | PFRI_20500 | Not Available | Positive | 2028489 - 2030945 | 89535.5 |
| hypothetical protein | PFRI_20510 | Not Available | Positive | 2030964 - 2032199 | 43214.0 |
| trimethylamine dehydrogenase | PFRI_20520 | Not Available | Positive | 2032192 - 2034234 | 74368.8 |
| hypothetical protein | PFRI_20530 | Not Available | Positive | 2034351 - 2035664 | 44189.3 |
| hypothetical protein | PFRI_20540 | Not Available | Positive | 2035706 - 2036203 | 17293.8 |
| hypothetical protein | PFRI_20550 | Not Available | Positive | 2036161 - 2036463 | 9390.38 |
| hypothetical protein | PFRI_20560 | Not Available | Positive | 2036915 - 2038189 | 47357.0 |
| putative glycosyl transferase | PFRI_20570 | Not Available | Positive | 2038239 - 2038802 | 21180.5 |
| hypothetical protein | PFRI_20580 | Not Available | Negative | 2038845 - 2039018 | 6433.71 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
