Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktotalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktotalea |
| Species | Planktotalea frisia |
| Strain | SH6-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950073 bp
Thymine Count
948589 bp
Guanine Count
1104133 bp
Cytosine Count
1103941 bp
Genome Length
4106736 bp
Protein-coding Genes
4102 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydroxypyruvate reductase | PFRI_20390 | Not Available | Negative | 2016387 - 2017373 | 36288.4 |
| 4-oxalomesaconate tautomerase | PFRI_20400 | Not Available | Negative | 2017370 - 2018467 | 38332.9 |
| tripartite tricarboxylate transporter tcta family protein | PFRI_20410 | Not Available | Negative | 2018464 - 2020491 | 71595.4 |
| hypothetical protein | PFRI_20420 | Not Available | Negative | 2020564 - 2021652 | 38541.4 |
| response regulator arlr | PFRI_20430 | Not Available | Positive | 2021778 - 2022446 | 24398.8 |
| sensor protein qsec | PFRI_20440 | Not Available | Positive | 2022443 - 2023819 | 50093.4 |
| hypothetical protein | PFRI_20450 | Not Available | Positive | 2023969 - 2024265 | 10395.4 |
| hth-type transcriptional regulator kipr | PFRI_20460 | Not Available | Negative | 2024459 - 2025223 | 27500.1 |
| tripartite tricarboxylate transporter family receptor | PFRI_20470 | Not Available | Positive | 2025389 - 2026339 | 32948.6 |
| tripartite tricarboxylate transporter tctb family protein | PFRI_20480 | Not Available | Positive | 2026418 - 2026957 | 20603.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
