Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktotalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktotalea |
| Species | Planktotalea frisia |
| Strain | SH6-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950073 bp
Thymine Count
948589 bp
Guanine Count
1104133 bp
Cytosine Count
1103941 bp
Genome Length
4106736 bp
Protein-coding Genes
4102 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| oxygen regulatory protein nrec | PFRI_19980 | Not Available | Negative | 1968593 - 1969234 | 23053.9 |
| oxygen sensor histidine kinase nreb | PFRI_19990 | Not Available | Negative | 1969231 - 1970673 | 53014.3 |
| monocarboxylate 2-oxoacid-binding periplasmic protein precursor | PFRI_20000 | Not Available | Positive | 1970938 - 1972026 | 38473.1 |
| tripartite atp-independent periplasmic transporter, dctq component | PFRI_20010 | Not Available | Positive | 1972152 - 1973078 | 35535.4 |
| ectoine trap transporter large permease protein teac | PFRI_20020 | Not Available | Positive | 1973078 - 1975432 | 82950.2 |
| putative arginyl-trna--protein transferase | PFRI_20030 | Not Available | Negative | 1975538 - 1976362 | 30762.6 |
| rdd family protein | PFRI_20040 | Not Available | Negative | 1976447 - 1976887 | 16247.3 |
| hypothetical protein | PFRI_20050 | Not Available | Negative | 1976966 - 1977418 | 16940.7 |
| proline--trna ligase | PFRI_20060 | Not Available | Negative | 1977529 - 1977996 | 16107.3 |
| hypothetical protein | PFRI_20080 | Not Available | Positive | 1980873 - 1981139 | 9709.68 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
