Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktotalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktotalea |
| Species | Planktotalea frisia |
| Strain | SH6-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950073 bp
Thymine Count
948589 bp
Guanine Count
1104133 bp
Cytosine Count
1103941 bp
Genome Length
4106736 bp
Protein-coding Genes
4102 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide chain release factor 2 | PFRI_19880 | Not Available | Positive | 1959074 - 1960201 | 41556.2 |
| acylamidase | PFRI_19890 | Not Available | Positive | 1960223 - 1961647 | 50740.6 |
| hypothetical protein | PFRI_19900 | Not Available | Positive | 1961687 - 1962472 | 29356.1 |
| hypothetical protein | PFRI_19910 | Not Available | Negative | 1962469 - 1962681 | 7655.95 |
| biphenyl dioxygenase subunit alpha | PFRI_19920 | Not Available | Negative | 1962678 - 1963838 | 43519.3 |
| helix-turn-helix domain protein | PFRI_19930 | Not Available | Negative | 1963939 - 1964736 | 30397.4 |
| hypothetical protein | PFRI_19940 | Not Available | Positive | 1964954 - 1965310 | 13046.6 |
| acetolactate synthase isozyme 3 small subunit | PFRI_19950 | Not Available | Negative | 1965343 - 1965903 | 20020.1 |
| acetolactate synthase isozyme 3 large subunit | PFRI_19960 | Not Available | Negative | 1965970 - 1967724 | 63872.8 |
| ribosomal large subunit pseudouridine synthase e | PFRI_19970 | Not Available | Negative | 1968051 - 1968596 | 20371.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
