Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktotalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktotalea |
| Species | Planktotalea frisia |
| Strain | SH6-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950073 bp
Thymine Count
948589 bp
Guanine Count
1104133 bp
Cytosine Count
1103941 bp
Genome Length
4106736 bp
Protein-coding Genes
4102 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Dna-binding protein | PFRI_10950 | Not Available | Positive | 1106122 - 1108104 | 71780.8 |
| hypothetical protein | PFRI_10960 | Not Available | Positive | 1108179 - 1108772 | 21621.8 |
| hypothetical protein | PFRI_10970 | Not Available | Positive | 1108772 - 1109428 | 24280.5 |
| Darb-like antirestriction protein | PFRI_10980 | Not Available | Positive | 1109542 - 1110462 | 32668.5 |
| Transposase | PFRI_10990 | Not Available | Negative | 1110611 - 1111840 | 45229.6 |
| Putative transposase orfb | PFRI_11000 | Not Available | Negative | 1112097 - 1113077 | 38132.2 |
| Transposase | PFRI_11010 | Not Available | Negative | 1113074 - 1113448 | 13909.8 |
| Site-specific recombinase, phage integrase family | PFRI_11020 | Not Available | Negative | 1114090 - 1114722 | 24038.5 |
| Putative transketolase central region-containing protein | PFRI_23970 | Not Available | Positive | 2372311 - 2373681 | 48888.3 |
| dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex | PFRI_23980 | Not Available | Positive | 2373694 - 2374977 | 44503.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
