Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktotalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktotalea |
| Species | Planktotalea frisia |
| Strain | SH6-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950073 bp
Thymine Count
948589 bp
Guanine Count
1104133 bp
Cytosine Count
1103941 bp
Genome Length
4106736 bp
Protein-coding Genes
4102 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ll-diaminopimelate aminotransferase | PFRI_19580 | Not Available | Negative | 1928933 - 1930111 | 43294.4 |
| glutamyl-trna(gln) amidotransferase subunit a | PFRI_19590 | Not Available | Negative | 1930222 - 1931550 | 45999.3 |
| 2-octaprenyl-6-methoxyphenol hydroxylase | PFRI_19600 | Not Available | Positive | 1931593 - 1932852 | 45093.4 |
| hypothetical protein | PFRI_19610 | Not Available | Negative | 1932849 - 1933034 | 6747.23 |
| lon protease 2 | PFRI_19620 | Not Available | Negative | 1933031 - 1933675 | 24372.4 |
| thioredoxin-1 | PFRI_19630 | Not Available | Negative | 1933703 - 1934617 | 32051.8 |
| exodeoxyribonuclease iii | PFRI_19640 | Not Available | Negative | 1934692 - 1935480 | 29461.0 |
| phthiocerol synthesis polyketide synthase type i ppsc | PFRI_19650 | Not Available | Negative | 1935519 - 1936514 | 35217.5 |
| hypothetical protein | PFRI_19660 | Not Available | Negative | 1936507 - 1936671 | 6115.46 |
| glyoxalase/bleomycin resistance protein/dioxygenase superfamily protein | PFRI_19670 | Not Available | Negative | 1936664 - 1937044 | 14155.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
